Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 C2orf74-203ENST00000432605 887 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
UBE4BO95155 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
UBE4BO95155 LINC00894-207ENST00000452864 750 ntTSL 5 BASIC9.5□□□□□ -0.89
UBE4BO95155 AL391825.1-202ENST00000458136 741 ntBASIC9.5□□□□□ -0.89
UBE4BO95155 PSMD6-AS1-201ENST00000462717 441 ntTSL 3 BASIC9.5□□□□□ -0.89
UBE4BO95155 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
UBE4BO95155 RPL22-207ENST00000484532 449 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC9.5□□□□□ -0.89
UBE4BO95155 LINC02301-202ENST00000555150 428 ntTSL 3 BASIC9.5□□□□□ -0.89
UBE4BO95155 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBE4BO95155 LINC01572-202ENST00000563770 568 ntTSL 5 BASIC9.5□□□□□ -0.89
UBE4BO95155 AC093249.5-201ENST00000568120 430 ntBASIC9.5□□□□□ -0.89
UBE4BO95155 FRG2JP-201ENST00000568299 832 ntBASIC9.5□□□□□ -0.89
UBE4BO95155 RPL23AP86-201ENST00000573796 541 ntBASIC9.5□□□□□ -0.89
UBE4BO95155 DYM-207ENST00000578396 755 ntTSL 3 BASIC9.5□□□□□ -0.89
UBE4BO95155 GMFG-204ENST00000595636 487 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 AC022149.1-201ENST00000596032 609 ntBASIC9.5□□□□□ -0.89
UBE4BO95155 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 LINC01929-201ENST00000589125 3067 ntTSL 2 BASIC9.5□□□□□ -0.89
UBE4BO95155 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
UBE4BO95155 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC9.5□□□□□ -0.89
UBE4BO95155 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
UBE4BO95155 AL445250.1-204ENST00000641775 1723 ntBASIC9.5□□□□□ -0.89
UBE4BO95155 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC9.49□□□□□ -0.89
UBE4BO95155 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC9.49□□□□□ -0.89
UBE4BO95155 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC9.49□□□□□ -0.89
UBE4BO95155 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 CCNB1IP1-201ENST00000353689 1305 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
UBE4BO95155 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 ZNF714-210ENST00000620627 2066 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 FBXO38-202ENST00000340253 4424 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
UBE4BO95155 KIR2DL4-202ENST00000346587 1026 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 SCNM1-201ENST00000368902 869 ntTSL 2 BASIC9.49□□□□□ -0.89
UBE4BO95155 TMED5-201ENST00000370280 750 ntTSL 2 BASIC9.49□□□□□ -0.89
UBE4BO95155 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
UBE4BO95155 PTPN20-205ENST00000395721 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 AL355526.1-201ENST00000420347 215 ntTSL 5 BASIC9.49□□□□□ -0.89
UBE4BO95155 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC9.49□□□□□ -0.89
UBE4BO95155 AL359094.1-210ENST00000432554 730 ntTSL 3 BASIC9.49□□□□□ -0.89
UBE4BO95155 AC074121.1-201ENST00000441836 348 ntBASIC9.49□□□□□ -0.89
UBE4BO95155 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC9.49□□□□□ -0.89
UBE4BO95155 AL450023.2-201ENST00000453276 545 ntBASIC9.49□□□□□ -0.89
UBE4BO95155 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC9.49□□□□□ -0.89
UBE4BO95155 ANAPC10-209ENST00000507656 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 ZNF123P-201ENST00000531501 1196 ntBASIC9.49□□□□□ -0.89
UBE4BO95155 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC9.49□□□□□ -0.89
UBE4BO95155 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
UBE4BO95155 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC9.49□□□□□ -0.89
UBE4BO95155 TAS2R38-201ENST00000547270 1143 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
UBE4BO95155 PCED1B-AS1-204ENST00000547851 780 ntTSL 3 BASIC9.49□□□□□ -0.89
UBE4BO95155 PRR13-206ENST00000549135 755 ntAPPRIS ALT2 TSL 3 BASIC9.49□□□□□ -0.89
UBE4BO95155 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC9.49□□□□□ -0.89
UBE4BO95155 AC024270.3-201ENST00000565513 396 ntTSL 3 BASIC9.49□□□□□ -0.89
UBE4BO95155 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC9.49□□□□□ -0.89
UBE4BO95155 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 LINC02018-202ENST00000608707 445 ntTSL 3 BASIC9.49□□□□□ -0.89
UBE4BO95155 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 CSF3R-203ENST00000373103 3454 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
UBE4BO95155 STXBP5L-208ENST00000497029 3036 ntTSL 5 BASIC9.49□□□□□ -0.89
UBE4BO95155 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 GTF2IP7-201ENST00000434037 2399 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 HHLA1-202ENST00000434736 2369 ntAPPRIS P5 TSL 5 BASIC9.48□□□□□ -0.89
UBE4BO95155 CEP128-209ENST00000555265 4662 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
UBE4BO95155 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
UBE4BO95155 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 NF1P1-201ENST00000604105 2645 ntBASIC9.48□□□□□ -0.89
UBE4BO95155 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE4BO95155 AL033381.1-201ENST00000314040 3435 ntTSL 2 BASIC9.48□□□□□ -0.89
UBE4BO95155 CYP2C8-211ENST00000539050 2024 ntTSL 3 BASIC9.48□□□□□ -0.89
UBE4BO95155 SH2D4B-202ENST00000339284 3983 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
UBE4BO95155 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
UBE4BO95155 ATP9B-202ENST00000426216 4361 ntTSL 5 BASIC9.48□□□□□ -0.89
UBE4BO95155 AC005538.2-201ENST00000623215 1864 ntBASIC9.48□□□□□ -0.89
UBE4BO95155 TMPRSS11B-201ENST00000332644 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC9.48□□□□□ -0.89
UBE4BO95155 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC9.48□□□□□ -0.89
UBE4BO95155 RETNLB-201ENST00000295755 676 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
UBE4BO95155 MT1X-201ENST00000394485 450 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
UBE4BO95155 CNN2P7-201ENST00000400583 932 ntBASIC9.48□□□□□ -0.89
UBE4BO95155 RPSAP8-201ENST00000429844 889 ntBASIC9.48□□□□□ -0.89
UBE4BO95155 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC9.48□□□□□ -0.89
UBE4BO95155 TSSK1A-201ENST00000450724 768 ntBASIC9.48□□□□□ -0.89
UBE4BO95155 RN7SL700P-201ENST00000496982 294 ntBASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms