Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LMO3Q8TAP4 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LMO3Q8TAP4 CABLES1-202ENST00000400473 1544 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.93
LMO3Q8TAP4 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC9.21□□□□□ -0.93
LMO3Q8TAP4 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LMO3Q8TAP4 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LMO3Q8TAP4 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC9.21□□□□□ -0.93
LMO3Q8TAP4 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
LMO3Q8TAP4 AC025580.2-204ENST00000560077 2399 ntTSL 5 BASIC9.21□□□□□ -0.93
LMO3Q8TAP4 OR7A17-203ENST00000642123 3565 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
LMO3Q8TAP4 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC9.21□□□□□ -0.93
LMO3Q8TAP4 GPN1-210ENST00000515877 1646 ntTSL 5 BASIC9.21□□□□□ -0.93
LMO3Q8TAP4 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 COX17P1-201ENST00000378775 192 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 NINJ2-202ENST00000397265 793 ntAPPRIS ALT2 TSL 3 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 TUBB4BP7-201ENST00000406999 1234 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 RPL10P5-201ENST00000427719 639 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 MTND6P15-201ENST00000441157 521 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 AC242426.2-201ENST00000446956 795 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 HNRNPA1P31-201ENST00000448627 970 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 RN7SL757P-201ENST00000466709 301 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 AC093270.1-201ENST00000482584 486 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 RN7SL573P-201ENST00000485340 276 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 RPS3P7-201ENST00000488662 726 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 ANAPC10-209ENST00000507656 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 MTND6P17-201ENST00000511811 519 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 FLT1-205ENST00000543394 1275 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 AC010809.2-201ENST00000560404 964 ntTSL 5 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 AP006545.1-201ENST00000563059 911 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 RFPL3S-206ENST00000621921 433 ntBASIC9.21□□□□□ -0.94
LMO3Q8TAP4 LINC01170-202ENST00000628324 650 ntTSL 2 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 ITFG2-AS1-202ENST00000636122 962 ntTSL 5 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 CEACAM1-204ENST00000358394 1484 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 PQLC2L-203ENST00000449199 1484 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC9.21□□□□□ -0.94
LMO3Q8TAP4 NUTM1-203ENST00000537011 4102 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 TTC33-201ENST00000337702 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 AC092894.1-201ENST00000486726 1563 ntTSL 5 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 ARL6IP5-201ENST00000273258 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 SBNO1-203ENST00000602398 4313 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 ALDH1L2-201ENST00000258494 7547 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 TMEM19-204ENST00000549735 1772 ntTSL 2 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 CLEC12B-201ENST00000338896 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 RN7SKP239-201ENST00000364814 295 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 GSTA4-202ENST00000370960 859 ntTSL 3 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 FTH1P3-201ENST00000394290 584 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 MAGEC3-202ENST00000409007 1290 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 RN7SKP139-201ENST00000410411 293 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 IFITM4P-207ENST00000441380 420 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 IGKV1D-35-201ENST00000442736 271 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 AC069213.3-201ENST00000454858 474 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 AC020636.1-201ENST00000469268 565 ntTSL 4 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 DNAJC19-205ENST00000479269 610 ntTSL 3 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 C3orf52-204ENST00000480282 1080 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 LINCR-0001-201ENST00000517732 562 ntTSL 4 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 AC243972.2-201ENST00000541653 991 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 ILF2P2-201ENST00000547482 1117 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 AC020892.2-201ENST00000557891 387 ntTSL 3 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 AC007952.7-201ENST00000583141 757 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 AC090950.1-201ENST00000604625 830 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 AC097534.2-202ENST00000608794 587 ntTSL 2 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 SNCA-212ENST00000611107 297 ntTSL 5 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 Metazoa_SRP.71-201ENST00000612122 282 ntBASIC9.2□□□□□ -0.94
LMO3Q8TAP4 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
LMO3Q8TAP4 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms