Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AP005212.1-201ENST00000581547 1997 ntBASIC19.77■□□□□ 0.75
PCDHGA11Q9Y5H2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHGA11Q9Y5H2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.77■□□□□ 0.75
PCDHGA11Q9Y5H2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
PCDHGA11Q9Y5H2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA11Q9Y5H2 AC073314.1-201ENST00000568729 2216 ntBASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 AC007322.3-201ENST00000426526 701 ntBASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 KRT18P5-201ENST00000436075 1291 ntBASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHGA11Q9Y5H2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 CDV3P1-201ENST00000471403 739 ntBASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
PCDHGA11Q9Y5H2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 AC137761.2-201ENST00000561729 223 ntBASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 AC145350.3-201ENST00000569033 163 ntBASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 AC010536.3-201ENST00000620306 533 ntBASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PCDHGA11Q9Y5H2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA11Q9Y5H2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms