Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC128676.1-201ENST00000454392 318 ntBASIC19.8■□□□□ 0.76
PCDHGA3Q9Y5H0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PCDHGA3Q9Y5H0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA3Q9Y5H0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA3Q9Y5H0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PCDHGA3Q9Y5H0 AC005229.4-201ENST00000610085 2198 ntBASIC19.8■□□□□ 0.76
PCDHGA3Q9Y5H0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 CYP2T3P-201ENST00000601990 817 ntBASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCDHGA3Q9Y5H0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 AP003097.1-201ENST00000530657 1135 ntBASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA3Q9Y5H0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 KRT17P1-201ENST00000399211 1546 ntBASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA3Q9Y5H0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHGA3Q9Y5H0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
PCDHGA3Q9Y5H0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.77■□□□□ 0.75
PCDHGA3Q9Y5H0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHGA3Q9Y5H0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 AF106564.1-201ENST00000607058 2553 ntBASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 AC142381.4-202ENST00000563973 229 ntBASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 AL589743.5-201ENST00000616611 1050 ntBASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHGA3Q9Y5H0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 AL355472.2-201ENST00000422958 438 ntBASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms