Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTCBQ9Y3I0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RTCBQ9Y3I0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTCBQ9Y3I0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTCBQ9Y3I0 KRT18P35-201ENST00000510488 1269 ntBASIC25.95■■□□□ 1.74
RTCBQ9Y3I0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.95■■□□□ 1.74
RTCBQ9Y3I0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTCBQ9Y3I0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTCBQ9Y3I0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RTCBQ9Y3I0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 HTR7P1-201ENST00000538670 1336 ntBASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RTCBQ9Y3I0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTCBQ9Y3I0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RTCBQ9Y3I0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTCBQ9Y3I0 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.93■■□□□ 1.74
RTCBQ9Y3I0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.93■■□□□ 1.74
RTCBQ9Y3I0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTCBQ9Y3I0 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.93■■□□□ 1.74
RTCBQ9Y3I0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RTCBQ9Y3I0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 KRT16P5-201ENST00000455284 522 ntBASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 AL121829.2-201ENST00000620908 328 ntBASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
RTCBQ9Y3I0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
RTCBQ9Y3I0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 ARMC10P1-201ENST00000313754 855 ntBASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.9■■□□□ 1.74
RTCBQ9Y3I0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.89■■□□□ 1.74
RTCBQ9Y3I0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.89■■□□□ 1.74
RTCBQ9Y3I0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
RTCBQ9Y3I0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RTCBQ9Y3I0 AL353807.1-201ENST00000427475 662 ntBASIC25.89■■□□□ 1.74
RTCBQ9Y3I0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
RTCBQ9Y3I0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.89■■□□□ 1.74
RTCBQ9Y3I0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.89■■□□□ 1.73
RTCBQ9Y3I0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
RTCBQ9Y3I0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RTCBQ9Y3I0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RTCBQ9Y3I0 FAM197Y1-201ENST00000421178 764 ntBASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms