Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.93■■□□□ 1.1
SSX2IPQ9Y2D8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 MIR718-201ENST00000390190 70 ntBASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 PGM5P4-201ENST00000421970 445 ntBASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 AC008550.1-201ENST00000511500 884 ntBASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 FAM197Y4-202ENST00000622692 608 ntBASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSX2IPQ9Y2D8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SSX2IPQ9Y2D8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SSX2IPQ9Y2D8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SSX2IPQ9Y2D8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SSX2IPQ9Y2D8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.1
SSX2IPQ9Y2D8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.89■■□□□ 1.1
SSX2IPQ9Y2D8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SSX2IPQ9Y2D8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms