Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DKK4Q9UBT3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 TPM4P1-201ENST00000436100 807 ntBASIC19.16■□□□□ 0.66
DKK4Q9UBT3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 WWOX-216ENST00000569818 525 ntBASIC19.16■□□□□ 0.66
DKK4Q9UBT3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DKK4Q9UBT3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 UPK3BP1-201ENST00000428678 509 ntBASIC19.15■□□□□ 0.66
DKK4Q9UBT3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.15■□□□□ 0.66
DKK4Q9UBT3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.15■□□□□ 0.66
DKK4Q9UBT3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
DKK4Q9UBT3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
DKK4Q9UBT3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.14■□□□□ 0.66
DKK4Q9UBT3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
DKK4Q9UBT3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 AP002982.1-201ENST00000492365 877 ntBASIC19.14■□□□□ 0.65
DKK4Q9UBT3 KRT126P-201ENST00000549467 1181 ntBASIC19.14■□□□□ 0.65
DKK4Q9UBT3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
DKK4Q9UBT3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 LINC01238-205ENST00000567549 1107 ntBASIC19.13■□□□□ 0.65
DKK4Q9UBT3 AC004264.1-201ENST00000608354 794 ntBASIC19.13■□□□□ 0.65
DKK4Q9UBT3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.13■□□□□ 0.65
DKK4Q9UBT3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
DKK4Q9UBT3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms