Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HACD3Q9P035 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HACD3Q9P035 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HACD3Q9P035 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.61■□□□□ 0.89
HACD3Q9P035 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HACD3Q9P035 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HACD3Q9P035 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HACD3Q9P035 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HACD3Q9P035 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HACD3Q9P035 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.61■□□□□ 0.89
HACD3Q9P035 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.61■□□□□ 0.89
HACD3Q9P035 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HACD3Q9P035 AC073111.5-205ENST00000641717 521 ntBASIC20.61■□□□□ 0.89
HACD3Q9P035 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.61■□□□□ 0.89
HACD3Q9P035 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.61■□□□□ 0.89
HACD3Q9P035 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HACD3Q9P035 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HACD3Q9P035 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HACD3Q9P035 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
HACD3Q9P035 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HACD3Q9P035 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.6■□□□□ 0.89
HACD3Q9P035 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.6■□□□□ 0.89
HACD3Q9P035 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HACD3Q9P035 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.6■□□□□ 0.89
HACD3Q9P035 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.6■□□□□ 0.89
HACD3Q9P035 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
HACD3Q9P035 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HACD3Q9P035 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HACD3Q9P035 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HACD3Q9P035 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.6■□□□□ 0.89
HACD3Q9P035 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.59■□□□□ 0.89
HACD3Q9P035 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HACD3Q9P035 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HACD3Q9P035 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HACD3Q9P035 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HACD3Q9P035 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HACD3Q9P035 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
HACD3Q9P035 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
HACD3Q9P035 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.59■□□□□ 0.89
HACD3Q9P035 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HACD3Q9P035 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.59■□□□□ 0.89
HACD3Q9P035 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.59■□□□□ 0.89
HACD3Q9P035 AC069236.1-201ENST00000604339 616 ntBASIC20.59■□□□□ 0.89
HACD3Q9P035 AC092666.2-201ENST00000613287 246 ntBASIC20.59■□□□□ 0.89
HACD3Q9P035 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HACD3Q9P035 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HACD3Q9P035 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HACD3Q9P035 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HACD3Q9P035 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.59■□□□□ 0.89
HACD3Q9P035 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HACD3Q9P035 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HACD3Q9P035 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.58■□□□□ 0.89
HACD3Q9P035 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.58■□□□□ 0.89
HACD3Q9P035 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.58■□□□□ 0.89
HACD3Q9P035 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.58■□□□□ 0.89
HACD3Q9P035 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.58■□□□□ 0.89
HACD3Q9P035 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.58■□□□□ 0.89
HACD3Q9P035 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.58■□□□□ 0.89
HACD3Q9P035 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
HACD3Q9P035 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HACD3Q9P035 RARRES2P4-201ENST00000514074 484 ntBASIC20.58■□□□□ 0.89
HACD3Q9P035 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.58■□□□□ 0.89
HACD3Q9P035 AC016405.3-201ENST00000607710 860 ntBASIC20.58■□□□□ 0.89
HACD3Q9P035 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.58■□□□□ 0.89
HACD3Q9P035 AC008694.1-202ENST00000636953 945 ntBASIC20.58■□□□□ 0.89
HACD3Q9P035 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HACD3Q9P035 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HACD3Q9P035 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
HACD3Q9P035 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HACD3Q9P035 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HACD3Q9P035 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
HACD3Q9P035 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
HACD3Q9P035 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HACD3Q9P035 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HACD3Q9P035 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HACD3Q9P035 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HACD3Q9P035 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms