Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.78■□□□□ 0.92
UBP1Q9NZI7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 LINC01521-201ENST00000504184 1943 ntBASIC20.77■□□□□ 0.92
UBP1Q9NZI7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBP1Q9NZI7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBP1Q9NZI7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
UBP1Q9NZI7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBP1Q9NZI7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
UBP1Q9NZI7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 AL391422.3-201ENST00000603791 2761 ntBASIC20.76■□□□□ 0.91
UBP1Q9NZI7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 MIR2861-201ENST00000636310 90 ntBASIC20.76■□□□□ 0.91
UBP1Q9NZI7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 AC068338.2-201ENST00000563278 1430 ntBASIC20.76■□□□□ 0.91
UBP1Q9NZI7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.76■□□□□ 0.91
UBP1Q9NZI7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 AC020907.5-201ENST00000624372 1936 ntBASIC20.75■□□□□ 0.91
UBP1Q9NZI7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 AC007322.4-201ENST00000509611 723 ntBASIC20.75■□□□□ 0.91
UBP1Q9NZI7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBP1Q9NZI7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
UBP1Q9NZI7 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.74■□□□□ 0.91
UBP1Q9NZI7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBP1Q9NZI7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
UBP1Q9NZI7 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.74■□□□□ 0.91
UBP1Q9NZI7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBP1Q9NZI7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.74■□□□□ 0.91
UBP1Q9NZI7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.74■□□□□ 0.91
UBP1Q9NZI7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
UBP1Q9NZI7 AL137784.2-201ENST00000607332 1000 ntBASIC20.74■□□□□ 0.91
UBP1Q9NZI7 GABARAPL3-202ENST00000624044 1851 ntBASIC20.74■□□□□ 0.91
UBP1Q9NZI7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBP1Q9NZI7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.74■□□□□ 0.91
UBP1Q9NZI7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
UBP1Q9NZI7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms