Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19■□□□□ 0.63
RLIMQ9NVW2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19■□□□□ 0.63
RLIMQ9NVW2 KRT18P61-201ENST00000585825 1298 ntBASIC19■□□□□ 0.63
RLIMQ9NVW2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19■□□□□ 0.63
RLIMQ9NVW2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19■□□□□ 0.63
RLIMQ9NVW2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19■□□□□ 0.63
RLIMQ9NVW2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19■□□□□ 0.63
RLIMQ9NVW2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 RNF165-205ENST00000588679 2904 ntBASIC19■□□□□ 0.63
RLIMQ9NVW2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19■□□□□ 0.63
RLIMQ9NVW2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RLIMQ9NVW2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RLIMQ9NVW2 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RLIMQ9NVW2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RLIMQ9NVW2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RLIMQ9NVW2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RLIMQ9NVW2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RLIMQ9NVW2 AC245052.3-201ENST00000450182 901 ntBASIC18.99■□□□□ 0.63
RLIMQ9NVW2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RLIMQ9NVW2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.99■□□□□ 0.63
RLIMQ9NVW2 AC099778.1-201ENST00000568593 1911 ntBASIC18.99■□□□□ 0.63
RLIMQ9NVW2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RLIMQ9NVW2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RLIMQ9NVW2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RLIMQ9NVW2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RLIMQ9NVW2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RLIMQ9NVW2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RLIMQ9NVW2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.95■□□□□ 0.62
RLIMQ9NVW2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms