Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TLR9Q9NR96 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TLR9Q9NR96 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.76■■□□□ 1.07
TLR9Q9NR96 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.76■■□□□ 1.07
TLR9Q9NR96 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.76■■□□□ 1.07
TLR9Q9NR96 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.76■■□□□ 1.07
TLR9Q9NR96 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
TLR9Q9NR96 AC113410.3-201ENST00000623366 203 ntBASIC21.76■■□□□ 1.07
TLR9Q9NR96 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.76■■□□□ 1.07
TLR9Q9NR96 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TLR9Q9NR96 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TLR9Q9NR96 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TLR9Q9NR96 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TLR9Q9NR96 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TLR9Q9NR96 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TLR9Q9NR96 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.75■■□□□ 1.07
TLR9Q9NR96 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TLR9Q9NR96 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.75■■□□□ 1.07
TLR9Q9NR96 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TLR9Q9NR96 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TLR9Q9NR96 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.75■■□□□ 1.07
TLR9Q9NR96 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.75■■□□□ 1.07
TLR9Q9NR96 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.75■■□□□ 1.07
TLR9Q9NR96 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.75■■□□□ 1.07
TLR9Q9NR96 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TLR9Q9NR96 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TLR9Q9NR96 AC133561.5-201ENST00000635547 218 ntBASIC21.75■■□□□ 1.07
TLR9Q9NR96 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TLR9Q9NR96 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TLR9Q9NR96 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TLR9Q9NR96 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.74■■□□□ 1.07
TLR9Q9NR96 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.74■■□□□ 1.07
TLR9Q9NR96 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TLR9Q9NR96 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TLR9Q9NR96 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TLR9Q9NR96 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TLR9Q9NR96 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TLR9Q9NR96 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TLR9Q9NR96 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TLR9Q9NR96 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TLR9Q9NR96 RARRES2P10-201ENST00000564312 460 ntBASIC21.74■■□□□ 1.07
TLR9Q9NR96 AL356652.1-201ENST00000615962 565 ntBASIC21.74■■□□□ 1.07
TLR9Q9NR96 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.74■■□□□ 1.07
TLR9Q9NR96 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TLR9Q9NR96 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.74■■□□□ 1.07
TLR9Q9NR96 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.74■■□□□ 1.07
TLR9Q9NR96 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TLR9Q9NR96 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TLR9Q9NR96 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TLR9Q9NR96 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TLR9Q9NR96 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.73■■□□□ 1.07
TLR9Q9NR96 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TLR9Q9NR96 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.73■■□□□ 1.07
TLR9Q9NR96 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TLR9Q9NR96 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.73■■□□□ 1.07
TLR9Q9NR96 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.73■■□□□ 1.07
TLR9Q9NR96 PRKY-204ENST00000533551 1019 ntBASIC21.73■■□□□ 1.07
TLR9Q9NR96 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.73■■□□□ 1.07
TLR9Q9NR96 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TLR9Q9NR96 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TLR9Q9NR96 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.73■■□□□ 1.07
TLR9Q9NR96 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TLR9Q9NR96 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TLR9Q9NR96 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.73■■□□□ 1.07
TLR9Q9NR96 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TLR9Q9NR96 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TLR9Q9NR96 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TLR9Q9NR96 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TLR9Q9NR96 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TLR9Q9NR96 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.72■■□□□ 1.07
TLR9Q9NR96 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TLR9Q9NR96 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TLR9Q9NR96 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TLR9Q9NR96 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.72■■□□□ 1.07
TLR9Q9NR96 AC087499.1-201ENST00000418141 1075 ntBASIC21.72■■□□□ 1.07
TLR9Q9NR96 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.72■■□□□ 1.07
TLR9Q9NR96 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.72■■□□□ 1.07
TLR9Q9NR96 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TLR9Q9NR96 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.72■■□□□ 1.07
TLR9Q9NR96 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.72■■□□□ 1.07
TLR9Q9NR96 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TLR9Q9NR96 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TLR9Q9NR96 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TLR9Q9NR96 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TLR9Q9NR96 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TLR9Q9NR96 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TLR9Q9NR96 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.71■■□□□ 1.07
TLR9Q9NR96 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TLR9Q9NR96 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TLR9Q9NR96 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TLR9Q9NR96 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TLR9Q9NR96 TSPY15P-201ENST00000457163 923 ntBASIC21.71■■□□□ 1.07
TLR9Q9NR96 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.71■■□□□ 1.07
TLR9Q9NR96 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.71■■□□□ 1.07
TLR9Q9NR96 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TLR9Q9NR96 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TLR9Q9NR96 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.71■■□□□ 1.07
TLR9Q9NR96 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TLR9Q9NR96 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TLR9Q9NR96 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms