Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
GDF3Q9NR23 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GDF3Q9NR23 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
GDF3Q9NR23 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
GDF3Q9NR23 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.52■■□□□ 1.03
GDF3Q9NR23 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
GDF3Q9NR23 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.51■■□□□ 1.03
GDF3Q9NR23 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
GDF3Q9NR23 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GDF3Q9NR23 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.51■■□□□ 1.03
GDF3Q9NR23 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
GDF3Q9NR23 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.51■■□□□ 1.03
GDF3Q9NR23 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.51■■□□□ 1.03
GDF3Q9NR23 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.51■■□□□ 1.03
GDF3Q9NR23 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
GDF3Q9NR23 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GDF3Q9NR23 SMG8-203ENST00000578922 2178 ntBASIC21.51■■□□□ 1.03
GDF3Q9NR23 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
GDF3Q9NR23 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
GDF3Q9NR23 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.5■■□□□ 1.03
GDF3Q9NR23 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.5■■□□□ 1.03
GDF3Q9NR23 FP700111.2-201ENST00000619190 1892 ntBASIC21.5■■□□□ 1.03
GDF3Q9NR23 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
GDF3Q9NR23 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.5■■□□□ 1.03
GDF3Q9NR23 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 CDCA4P2-201ENST00000441182 718 ntBASIC21.5■■□□□ 1.03
GDF3Q9NR23 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.5■■□□□ 1.03
GDF3Q9NR23 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.5■■□□□ 1.03
GDF3Q9NR23 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
GDF3Q9NR23 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.5■■□□□ 1.03
GDF3Q9NR23 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.5■■□□□ 1.03
GDF3Q9NR23 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GDF3Q9NR23 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
GDF3Q9NR23 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
GDF3Q9NR23 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDF3Q9NR23 AC087289.5-201ENST00000586076 3175 ntBASIC21.49■■□□□ 1.03
GDF3Q9NR23 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDF3Q9NR23 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDF3Q9NR23 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GDF3Q9NR23 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GDF3Q9NR23 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.49■■□□□ 1.03
GDF3Q9NR23 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.49■■□□□ 1.03
GDF3Q9NR23 AC079140.4-201ENST00000507448 529 ntBASIC21.49■■□□□ 1.03
GDF3Q9NR23 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.49■■□□□ 1.03
GDF3Q9NR23 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.49■■□□□ 1.03
GDF3Q9NR23 RAP2CP1-201ENST00000605103 478 ntBASIC21.49■■□□□ 1.03
GDF3Q9NR23 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GDF3Q9NR23 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GDF3Q9NR23 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GDF3Q9NR23 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GDF3Q9NR23 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF3Q9NR23 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF3Q9NR23 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF3Q9NR23 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF3Q9NR23 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF3Q9NR23 AC026185.1-201ENST00000445748 174 ntBASIC21.48■■□□□ 1.03
GDF3Q9NR23 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF3Q9NR23 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF3Q9NR23 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF3Q9NR23 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GDF3Q9NR23 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
GDF3Q9NR23 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDF3Q9NR23 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF3Q9NR23 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDF3Q9NR23 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF3Q9NR23 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF3Q9NR23 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.47■■□□□ 1.03
GDF3Q9NR23 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF3Q9NR23 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF3Q9NR23 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
GDF3Q9NR23 KRT18P11-201ENST00000435214 1283 ntBASIC21.47■■□□□ 1.03
GDF3Q9NR23 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GDF3Q9NR23 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.47■■□□□ 1.03
GDF3Q9NR23 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.47■■□□□ 1.03
GDF3Q9NR23 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
GDF3Q9NR23 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.47■■□□□ 1.03
GDF3Q9NR23 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.47■■□□□ 1.03
GDF3Q9NR23 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GDF3Q9NR23 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms