Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.34■■□□□ 1.01
CD248Q9HCU0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CD248Q9HCU0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD248Q9HCU0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD248Q9HCU0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
CD248Q9HCU0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CD248Q9HCU0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD248Q9HCU0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD248Q9HCU0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CD248Q9HCU0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CD248Q9HCU0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CD248Q9HCU0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CD248Q9HCU0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CD248Q9HCU0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CD248Q9HCU0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.33■■□□□ 1.01
CD248Q9HCU0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CD248Q9HCU0 RBM17P2-201ENST00000616397 1405 ntBASIC21.33■■□□□ 1.01
CD248Q9HCU0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CD248Q9HCU0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CD248Q9HCU0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CD248Q9HCU0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CD248Q9HCU0 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.33■■□□□ 1.01
CD248Q9HCU0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.33■■□□□ 1.01
CD248Q9HCU0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CD248Q9HCU0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CD248Q9HCU0 MKRN4P-201ENST00000444706 1521 ntBASIC21.33■■□□□ 1
CD248Q9HCU0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1
CD248Q9HCU0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CD248Q9HCU0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CD248Q9HCU0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.33■■□□□ 1
CD248Q9HCU0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
CD248Q9HCU0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 KRT16P2-201ENST00000414673 1423 ntBASIC21.32■■□□□ 1
CD248Q9HCU0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.32■■□□□ 1
CD248Q9HCU0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.32■■□□□ 1
CD248Q9HCU0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.32■■□□□ 1
CD248Q9HCU0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.32■■□□□ 1
CD248Q9HCU0 AC016405.3-201ENST00000607710 860 ntBASIC21.32■■□□□ 1
CD248Q9HCU0 AC008175.2-201ENST00000612840 297 ntBASIC21.32■■□□□ 1
CD248Q9HCU0 AC092118.2-201ENST00000613495 667 ntBASIC21.32■■□□□ 1
CD248Q9HCU0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.32■■□□□ 1
CD248Q9HCU0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.32■■□□□ 1
CD248Q9HCU0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.32■■□□□ 1
CD248Q9HCU0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CD248Q9HCU0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CD248Q9HCU0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CD248Q9HCU0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CD248Q9HCU0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.31■■□□□ 1
CD248Q9HCU0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CD248Q9HCU0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CD248Q9HCU0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CD248Q9HCU0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CD248Q9HCU0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.31■■□□□ 1
CD248Q9HCU0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CD248Q9HCU0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.31■■□□□ 1
CD248Q9HCU0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.31■■□□□ 1
CD248Q9HCU0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.31■■□□□ 1
CD248Q9HCU0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.31■■□□□ 1
CD248Q9HCU0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CD248Q9HCU0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.31■■□□□ 1
CD248Q9HCU0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.31■■□□□ 1
CD248Q9HCU0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.31■■□□□ 1
CD248Q9HCU0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD248Q9HCU0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CD248Q9HCU0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.3■■□□□ 1
CD248Q9HCU0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
CD248Q9HCU0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
CD248Q9HCU0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.3■■□□□ 1
CD248Q9HCU0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.3■■□□□ 1
CD248Q9HCU0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD248Q9HCU0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.3■■□□□ 1
CD248Q9HCU0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.3■■□□□ 1
CD248Q9HCU0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.3■■□□□ 1
CD248Q9HCU0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.3■■□□□ 1
CD248Q9HCU0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.3■■□□□ 1
CD248Q9HCU0 AL162412.1-201ENST00000567129 965 ntBASIC21.3■■□□□ 1
CD248Q9HCU0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CD248Q9HCU0 AC066615.1-201ENST00000640911 628 ntBASIC21.3■■□□□ 1
CD248Q9HCU0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.3■■□□□ 1
CD248Q9HCU0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.3■■□□□ 1
CD248Q9HCU0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CD248Q9HCU0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
CD248Q9HCU0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CD248Q9HCU0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CD248Q9HCU0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.29■■□□□ 1
CD248Q9HCU0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
CD248Q9HCU0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms