Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AP005435.1-201ENST00000529293 1178 ntBASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 AL162377.1-201ENST00000618844 1793 ntBASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SND1-IT1Q9HBX3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 HES6-206ENST00000409574 738 ntTSL 2 BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 AC099778.1-201ENST00000568593 1911 ntBASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SND1-IT1Q9HBX3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 PTCHD3P2-201ENST00000424937 1205 ntBASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 MIR3621-201ENST00000580529 85 ntBASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.63□□□□□ -0.23
SND1-IT1Q9HBX3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 FP700111.2-201ENST00000619190 1892 ntBASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms