Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
EFCC1Q9HA90 AC239809.2-201ENST00000415381 517 ntBASIC23.8■■□□□ 1.4
EFCC1Q9HA90 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
EFCC1Q9HA90 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
EFCC1Q9HA90 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.8■■□□□ 1.4
EFCC1Q9HA90 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.79■■□□□ 1.4
EFCC1Q9HA90 AC007322.3-201ENST00000426526 701 ntBASIC23.79■■□□□ 1.4
EFCC1Q9HA90 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EFCC1Q9HA90 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 AC110285.5-201ENST00000611501 352 ntBASIC23.78■■□□□ 1.4
EFCC1Q9HA90 AL590326.2-201ENST00000625139 305 ntBASIC23.78■■□□□ 1.4
EFCC1Q9HA90 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.78■■□□□ 1.4
EFCC1Q9HA90 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 PRKY-204ENST00000533551 1019 ntBASIC23.77■■□□□ 1.4
EFCC1Q9HA90 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
EFCC1Q9HA90 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.76■■□□□ 1.39
EFCC1Q9HA90 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
EFCC1Q9HA90 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
EFCC1Q9HA90 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.76■■□□□ 1.39
EFCC1Q9HA90 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.76■■□□□ 1.39
EFCC1Q9HA90 AL049597.2-201ENST00000565575 961 ntBASIC23.76■■□□□ 1.39
EFCC1Q9HA90 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
EFCC1Q9HA90 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
EFCC1Q9HA90 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
EFCC1Q9HA90 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
EFCC1Q9HA90 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
EFCC1Q9HA90 CYP21A1P-202ENST00000354927 1481 ntBASIC23.75■■□□□ 1.39
EFCC1Q9HA90 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EFCC1Q9HA90 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
EFCC1Q9HA90 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.74■■□□□ 1.39
EFCC1Q9HA90 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.74■■□□□ 1.39
EFCC1Q9HA90 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
EFCC1Q9HA90 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms