Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 AC092720.2-201ENST00000602388 1665 ntBASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC40Q9H9A6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 FAM21FP-204ENST00000608637 956 ntBASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC40Q9H9A6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 AL591742.1-201ENST00000604433 565 ntBASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 AC013268.1-206ENST00000638368 961 ntBASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 AC112229.1-201ENST00000639295 961 ntBASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC40Q9H9A6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 AC016769.1-201ENST00000409132 1010 ntBASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 AC007322.4-201ENST00000509611 723 ntBASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 MIR5787-201ENST00000611784 55 ntBASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC40Q9H9A6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC40Q9H9A6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms