Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC25.74■■□□□ 1.71
CHMP4BQ9H444 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
CHMP4BQ9H444 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHMP4BQ9H444 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.73■■□□□ 1.71
CHMP4BQ9H444 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC25.73■■□□□ 1.71
CHMP4BQ9H444 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.73■■□□□ 1.71
CHMP4BQ9H444 DUX4L16-201ENST00000555130 1264 ntBASIC25.73■■□□□ 1.71
CHMP4BQ9H444 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHMP4BQ9H444 AC011767.1-201ENST00000617410 1153 ntBASIC25.73■■□□□ 1.71
CHMP4BQ9H444 AC100791.3-201ENST00000617619 330 ntBASIC25.73■■□□□ 1.71
CHMP4BQ9H444 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHMP4BQ9H444 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC25.73■■□□□ 1.71
CHMP4BQ9H444 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHMP4BQ9H444 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CHMP4BQ9H444 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CHMP4BQ9H444 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 AC231657.2-201ENST00000624556 255 ntBASIC25.72■■□□□ 1.71
CHMP4BQ9H444 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC25.72■■□□□ 1.71
CHMP4BQ9H444 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 AC087633.2-202ENST00000565166 1439 ntBASIC25.71■■□□□ 1.71
CHMP4BQ9H444 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHMP4BQ9H444 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CHMP4BQ9H444 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC25.7■■□□□ 1.7
CHMP4BQ9H444 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC25.69■■□□□ 1.7
CHMP4BQ9H444 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 RARRES2P4-201ENST00000514074 484 ntBASIC25.68■■□□□ 1.7
CHMP4BQ9H444 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms