Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42EP4Q9H3Q1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDC42EP4Q9H3Q1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDC42EP4Q9H3Q1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.77■□□□□ 0.92
CDC42EP4Q9H3Q1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42EP4Q9H3Q1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.77■□□□□ 0.92
CDC42EP4Q9H3Q1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDC42EP4Q9H3Q1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDC42EP4Q9H3Q1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.77■□□□□ 0.91
CDC42EP4Q9H3Q1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDC42EP4Q9H3Q1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CDC42EP4Q9H3Q1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 MIR572-201ENST00000384983 95 ntBASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 MIR2861-201ENST00000636310 90 ntBASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 AC018445.3-201ENST00000624177 1945 ntBASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.76■□□□□ 0.91
CDC42EP4Q9H3Q1 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 AC027682.1-201ENST00000562846 899 ntBASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.75■□□□□ 0.91
CDC42EP4Q9H3Q1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 POU5F1P4-201ENST00000413175 1085 ntBASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 AC008175.2-201ENST00000612840 297 ntBASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDC42EP4Q9H3Q1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.73■□□□□ 0.91
CDC42EP4Q9H3Q1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CDC42EP4Q9H3Q1 AC098818.2-201ENST00000564925 2320 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms