Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 AL596275.1-201ENST00000423464 877 ntBASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 RN7SL471P-201ENST00000580476 299 ntBASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
FAM49AQ9H0Q0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.52■■□□□ 1.19
FAM49AQ9H0Q0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 POM121L13P-201ENST00000422362 380 ntBASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 UBE2SP1-201ENST00000450587 669 ntBASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 AC008550.1-201ENST00000511500 884 ntBASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 AC006557.6-201ENST00000623071 864 ntBASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
FAM49AQ9H0Q0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 AC011484.1-201ENST00000377652 1995 ntBASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 AC012676.1-201ENST00000574705 1949 ntBASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
FAM49AQ9H0Q0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
FAM49AQ9H0Q0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.48■■□□□ 1.19
FAM49AQ9H0Q0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 AL024507.2-201ENST00000606070 2574 ntBASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.47■■□□□ 1.19
FAM49AQ9H0Q0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms