Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 GCSHP5-201ENST00000443090 522 ntBASIC21.22■□□□□ 0.99
RNF38Q9H0F5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF38Q9H0F5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 AF106564.1-201ENST00000607058 2553 ntBASIC21.21■□□□□ 0.99
RNF38Q9H0F5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 AC027702.1-201ENST00000563810 1770 ntBASIC21.21■□□□□ 0.99
RNF38Q9H0F5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RNF38Q9H0F5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.2■□□□□ 0.98
RNF38Q9H0F5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 SOX15-203ENST00000570788 1093 ntBASIC21.2■□□□□ 0.98
RNF38Q9H0F5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.2■□□□□ 0.98
RNF38Q9H0F5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF38Q9H0F5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 AC121338.2-201ENST00000622535 1744 ntBASIC21.19■□□□□ 0.98
RNF38Q9H0F5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 AC142381.4-202ENST00000563973 229 ntBASIC21.19■□□□□ 0.98
RNF38Q9H0F5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.19■□□□□ 0.98
RNF38Q9H0F5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF38Q9H0F5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 AL158047.1-201ENST00000445918 881 ntBASIC21.18■□□□□ 0.98
RNF38Q9H0F5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RNF38Q9H0F5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.17■□□□□ 0.98
RNF38Q9H0F5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms