Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 CYP2T3P-201ENST00000601990 817 ntBASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 AL356652.1-201ENST00000615962 565 ntBASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 KRT8P36-201ENST00000489121 1440 ntBASIC20.7■□□□□ 0.9
POLR1EQ9GZS1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 MKRN4P-201ENST00000444706 1521 ntBASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 NCF1B-203ENST00000435988 1254 ntBASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
POLR1EQ9GZS1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 KRT18P68-201ENST00000392293 1000 ntBASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 AC083906.2-201ENST00000511578 360 ntBASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
POLR1EQ9GZS1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 GPX1P1-201ENST00000388829 606 ntBASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
POLR1EQ9GZS1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 AL355472.2-201ENST00000422958 438 ntBASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 AC105020.6-201ENST00000621523 1217 ntBASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
POLR1EQ9GZS1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms