Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC090192.1-201ENST00000517740 490 ntBASIC18.75■□□□□ 0.59
TRIM2Q9C040 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM2Q9C040 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM2Q9C040 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM2Q9C040 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TRIM2Q9C040 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM2Q9C040 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRIM2Q9C040 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM2Q9C040 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRIM2Q9C040 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRIM2Q9C040 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TRIM2Q9C040 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 AC004911.1-201ENST00000416316 871 ntBASIC18.74■□□□□ 0.59
TRIM2Q9C040 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM2Q9C040 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRIM2Q9C040 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.74■□□□□ 0.59
TRIM2Q9C040 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM2Q9C040 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM2Q9C040 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM2Q9C040 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM2Q9C040 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM2Q9C040 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 AC091799.1-201ENST00000422823 811 ntBASIC18.73■□□□□ 0.59
TRIM2Q9C040 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 KRT18P61-201ENST00000585825 1298 ntBASIC18.73■□□□□ 0.59
TRIM2Q9C040 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM2Q9C040 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM2Q9C040 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM2Q9C040 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRIM2Q9C040 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.73■□□□□ 0.59
TRIM2Q9C040 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM2Q9C040 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM2Q9C040 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM2Q9C040 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM2Q9C040 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 MIR2861-201ENST00000636310 90 ntBASIC18.72■□□□□ 0.59
TRIM2Q9C040 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM2Q9C040 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM2Q9C040 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM2Q9C040 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRIM2Q9C040 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM2Q9C040 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRIM2Q9C040 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM2Q9C040 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM2Q9C040 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM2Q9C040 AC092720.2-201ENST00000602388 1665 ntBASIC18.71■□□□□ 0.59
TRIM2Q9C040 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM2Q9C040 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM2Q9C040 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 AC007322.3-201ENST00000426526 701 ntBASIC18.71■□□□□ 0.59
TRIM2Q9C040 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM2Q9C040 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRIM2Q9C040 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms