Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 AC008764.7-201ENST00000593779 1081 ntBASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 AL691432.2-201ENST00000607222 2038 ntBASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC10.34□□□□□ -0.75
KRTAP3-1Q9BYR8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 TSPY26P-201ENST00000476365 1326 ntBASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 AL136116.3-201ENST00000402907 1138 ntBASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 MPST-208ENST00000628507 698 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 AC005332.7-201ENST00000614046 2005 ntBASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP3-1Q9BYR8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-1Q9BYR8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-1Q9BYR8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-1Q9BYR8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-1Q9BYR8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP3-1Q9BYR8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP3-1Q9BYR8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP3-1Q9BYR8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms