Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 AL034346.1-201ENST00000568244 1277 ntBASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 MIR6722-201ENST00000617286 78 ntBASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 AC129492.7-201ENST00000622992 756 ntBASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC5.51□□□□□ -1.53
LCE3DQ9BYE3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 AC074183.2-201ENST00000623112 922 ntBASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 AL031602.1-201ENST00000633169 911 ntBASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 AC068587.7-201ENST00000641602 218 ntBASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LCE3DQ9BYE3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms