Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RSPO3Q9BXY4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RSPO3Q9BXY4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 AC007952.6-201ENST00000573168 2673 ntBASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 AC003957.1-201ENST00000625108 2673 ntBASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
RSPO3Q9BXY4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RSPO3Q9BXY4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 AC007322.3-201ENST00000426526 701 ntBASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.77■□□□□ 0.6
RSPO3Q9BXY4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RSPO3Q9BXY4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.77■□□□□ 0.59
RSPO3Q9BXY4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RSPO3Q9BXY4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RSPO3Q9BXY4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RSPO3Q9BXY4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
RSPO3Q9BXY4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 MIR935-201ENST00000401179 91 ntBASIC18.76■□□□□ 0.59
RSPO3Q9BXY4 KRT19P1-201ENST00000405746 1186 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms