Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL25A1Q9BXS0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL25A1Q9BXS0 MESTP1-201ENST00000404287 994 ntBASIC21.01■□□□□ 0.95
COL25A1Q9BXS0 AC007322.3-201ENST00000426526 701 ntBASIC21.01■□□□□ 0.95
COL25A1Q9BXS0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.01■□□□□ 0.95
COL25A1Q9BXS0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL25A1Q9BXS0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
COL25A1Q9BXS0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL25A1Q9BXS0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
COL25A1Q9BXS0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL25A1Q9BXS0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL25A1Q9BXS0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL25A1Q9BXS0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21■□□□□ 0.95
COL25A1Q9BXS0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL25A1Q9BXS0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COL25A1Q9BXS0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL25A1Q9BXS0 KSR1P1-201ENST00000446298 240 ntBASIC21■□□□□ 0.95
COL25A1Q9BXS0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
COL25A1Q9BXS0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21■□□□□ 0.95
COL25A1Q9BXS0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
COL25A1Q9BXS0 AP005242.2-201ENST00000580065 1175 ntBASIC21■□□□□ 0.95
COL25A1Q9BXS0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21■□□□□ 0.95
COL25A1Q9BXS0 AC011558.1-201ENST00000623459 338 ntBASIC21■□□□□ 0.95
COL25A1Q9BXS0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21■□□□□ 0.95
COL25A1Q9BXS0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COL25A1Q9BXS0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 KRT16P1-201ENST00000399124 1418 ntBASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.99■□□□□ 0.95
COL25A1Q9BXS0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 HLA-G-203ENST00000376818 1127 ntBASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 FAM220CP-201ENST00000395253 831 ntBASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 MIR3652-201ENST00000579335 131 ntBASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL25A1Q9BXS0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COL25A1Q9BXS0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
COL25A1Q9BXS0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL25A1Q9BXS0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
COL25A1Q9BXS0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.96■□□□□ 0.95
COL25A1Q9BXS0 HOMER2P1-201ENST00000455653 964 ntBASIC20.96■□□□□ 0.95
COL25A1Q9BXS0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.96■□□□□ 0.95
COL25A1Q9BXS0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
COL25A1Q9BXS0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL25A1Q9BXS0 LINC00526-201ENST00000581067 1875 ntBASIC20.96■□□□□ 0.95
COL25A1Q9BXS0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL25A1Q9BXS0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 AL359075.1-203ENST00000462729 1002 ntBASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 VENTXP5-201ENST00000523979 775 ntBASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
COL25A1Q9BXS0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL25A1Q9BXS0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms