Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPPED1Q9BRF8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPPED1Q9BRF8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 SLC7A5P2-201ENST00000553010 536 ntBASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 AC125437.2-201ENST00000625180 2167 ntBASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPPED1Q9BRF8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 DUX4L2-201ENST00000561772 1275 ntBASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 DUX4L6-201ENST00000626483 1275 ntBASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 DUX4L1-201ENST00000627662 1275 ntBASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 DUX4L8-201ENST00000629013 1275 ntBASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 DUX4L3-201ENST00000630187 1275 ntBASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 DUX4L7-201ENST00000630678 1275 ntBASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 DUX4L5-201ENST00000630834 1275 ntBASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.16■□□□□ 0.66
CPPED1Q9BRF8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 AC027612.3-201ENST00000413684 1047 ntBASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPPED1Q9BRF8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
CPPED1Q9BRF8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CPPED1Q9BRF8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.14■□□□□ 0.65
CPPED1Q9BRF8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms