Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.38■□□□□ 0.37
CMSS1Q9BQ75 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 PBX2P1-201ENST00000493219 1291 ntBASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 EEF1DP3-203ENST00000566025 782 ntBASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.37■□□□□ 0.37
CMSS1Q9BQ75 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 AL512408.1-201ENST00000569378 2000 ntBASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 AC061975.6-201ENST00000579045 1553 ntBASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CMSS1Q9BQ75 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 AFG3L1P-217ENST00000557444 2447 ntBASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 AC131212.1-201ENST00000613771 668 ntBASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 LETM1P2-201ENST00000597330 2178 ntBASIC17.35■□□□□ 0.37
CMSS1Q9BQ75 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 AC096631.2-201ENST00000436136 790 ntBASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CMSS1Q9BQ75 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms