Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.48■□□□□ 0.71
BARD1Q99728 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BARD1Q99728 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.47■□□□□ 0.71
BARD1Q99728 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BARD1Q99728 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
BARD1Q99728 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.47■□□□□ 0.71
BARD1Q99728 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
BARD1Q99728 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BARD1Q99728 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.47■□□□□ 0.71
BARD1Q99728 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BARD1Q99728 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
BARD1Q99728 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BARD1Q99728 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BARD1Q99728 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BARD1Q99728 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BARD1Q99728 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.47■□□□□ 0.71
BARD1Q99728 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
BARD1Q99728 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.47■□□□□ 0.71
BARD1Q99728 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
BARD1Q99728 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
BARD1Q99728 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BARD1Q99728 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
BARD1Q99728 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
BARD1Q99728 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BARD1Q99728 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BARD1Q99728 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.46■□□□□ 0.71
BARD1Q99728 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BARD1Q99728 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
BARD1Q99728 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BARD1Q99728 GABARAPL3-202ENST00000624044 1851 ntBASIC19.46■□□□□ 0.71
BARD1Q99728 AC007952.6-201ENST00000573168 2673 ntBASIC19.46■□□□□ 0.71
BARD1Q99728 AC003957.1-201ENST00000625108 2673 ntBASIC19.46■□□□□ 0.71
BARD1Q99728 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
BARD1Q99728 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.46■□□□□ 0.71
BARD1Q99728 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.46■□□□□ 0.71
BARD1Q99728 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BARD1Q99728 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.46■□□□□ 0.71
BARD1Q99728 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.46■□□□□ 0.71
BARD1Q99728 AFG3L1P-217ENST00000557444 2447 ntBASIC19.46■□□□□ 0.71
BARD1Q99728 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
BARD1Q99728 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.46■□□□□ 0.71
BARD1Q99728 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BARD1Q99728 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
BARD1Q99728 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
BARD1Q99728 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BARD1Q99728 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BARD1Q99728 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.45■□□□□ 0.7
BARD1Q99728 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BARD1Q99728 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
BARD1Q99728 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BARD1Q99728 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.45■□□□□ 0.7
BARD1Q99728 AC138907.5-202ENST00000569484 235 ntBASIC19.45■□□□□ 0.7
BARD1Q99728 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.45■□□□□ 0.7
BARD1Q99728 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.45■□□□□ 0.7
BARD1Q99728 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BARD1Q99728 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.45■□□□□ 0.7
BARD1Q99728 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BARD1Q99728 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BARD1Q99728 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BARD1Q99728 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BARD1Q99728 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BARD1Q99728 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.45■□□□□ 0.7
BARD1Q99728 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
BARD1Q99728 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BARD1Q99728 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BARD1Q99728 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BARD1Q99728 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BARD1Q99728 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BARD1Q99728 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BARD1Q99728 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BARD1Q99728 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BARD1Q99728 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.44■□□□□ 0.7
BARD1Q99728 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.44■□□□□ 0.7
BARD1Q99728 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
BARD1Q99728 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
BARD1Q99728 AC010141.2-201ENST00000452426 721 ntBASIC19.44■□□□□ 0.7
BARD1Q99728 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BARD1Q99728 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.44■□□□□ 0.7
BARD1Q99728 SLC7A5P1-201ENST00000568957 537 ntBASIC19.44■□□□□ 0.7
BARD1Q99728 AC010536.3-201ENST00000620306 533 ntBASIC19.44■□□□□ 0.7
BARD1Q99728 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
BARD1Q99728 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
BARD1Q99728 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.44■□□□□ 0.7
BARD1Q99728 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.44■□□□□ 0.7
BARD1Q99728 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BARD1Q99728 AC006128.1-201ENST00000624704 1661 ntBASIC19.43■□□□□ 0.7
BARD1Q99728 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BARD1Q99728 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BARD1Q99728 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BARD1Q99728 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BARD1Q99728 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.43■□□□□ 0.7
BARD1Q99728 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BARD1Q99728 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.43■□□□□ 0.7
BARD1Q99728 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BARD1Q99728 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.43■□□□□ 0.7
BARD1Q99728 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BARD1Q99728 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms