Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TWNKQ96RR1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TWNKQ96RR1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TWNKQ96RR1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TWNKQ96RR1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TWNKQ96RR1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.71■■□□□ 1.07
TWNKQ96RR1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TWNKQ96RR1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TWNKQ96RR1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.71■■□□□ 1.07
TWNKQ96RR1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.71■■□□□ 1.07
TWNKQ96RR1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.71■■□□□ 1.07
TWNKQ96RR1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
TWNKQ96RR1 AC092118.2-201ENST00000613495 667 ntBASIC21.71■■□□□ 1.07
TWNKQ96RR1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TWNKQ96RR1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TWNKQ96RR1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TWNKQ96RR1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.71■■□□□ 1.07
TWNKQ96RR1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TWNKQ96RR1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TWNKQ96RR1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TWNKQ96RR1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TWNKQ96RR1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TWNKQ96RR1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.7■■□□□ 1.06
TWNKQ96RR1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.7■■□□□ 1.06
TWNKQ96RR1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.7■■□□□ 1.06
TWNKQ96RR1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TWNKQ96RR1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.7■■□□□ 1.06
TWNKQ96RR1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TWNKQ96RR1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TWNKQ96RR1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TWNKQ96RR1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TWNKQ96RR1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TWNKQ96RR1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TWNKQ96RR1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TWNKQ96RR1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
TWNKQ96RR1 LSM12P1-201ENST00000411836 588 ntBASIC21.69■■□□□ 1.06
TWNKQ96RR1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TWNKQ96RR1 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.69■■□□□ 1.06
TWNKQ96RR1 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.69■■□□□ 1.06
TWNKQ96RR1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.69■■□□□ 1.06
TWNKQ96RR1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TWNKQ96RR1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.69■■□□□ 1.06
TWNKQ96RR1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TWNKQ96RR1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TWNKQ96RR1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.69■■□□□ 1.06
TWNKQ96RR1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
TWNKQ96RR1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TWNKQ96RR1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TWNKQ96RR1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TWNKQ96RR1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TWNKQ96RR1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.68■■□□□ 1.06
TWNKQ96RR1 AL589743.5-201ENST00000616611 1050 ntBASIC21.68■■□□□ 1.06
TWNKQ96RR1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.68■■□□□ 1.06
TWNKQ96RR1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TWNKQ96RR1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TWNKQ96RR1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TWNKQ96RR1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.68■■□□□ 1.06
TWNKQ96RR1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TWNKQ96RR1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TWNKQ96RR1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TWNKQ96RR1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TWNKQ96RR1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TWNKQ96RR1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TWNKQ96RR1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TWNKQ96RR1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TWNKQ96RR1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.67■■□□□ 1.06
TWNKQ96RR1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TWNKQ96RR1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TWNKQ96RR1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TWNKQ96RR1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.67■■□□□ 1.06
TWNKQ96RR1 DUSP5P2-201ENST00000426873 1033 ntBASIC21.67■■□□□ 1.06
TWNKQ96RR1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TWNKQ96RR1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TWNKQ96RR1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TWNKQ96RR1 AL157384.1-201ENST00000445995 2473 ntBASIC21.67■■□□□ 1.06
TWNKQ96RR1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TWNKQ96RR1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.67■■□□□ 1.06
TWNKQ96RR1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.67■■□□□ 1.06
TWNKQ96RR1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TWNKQ96RR1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TWNKQ96RR1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TWNKQ96RR1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TWNKQ96RR1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TWNKQ96RR1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TWNKQ96RR1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TWNKQ96RR1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TWNKQ96RR1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TWNKQ96RR1 AC073314.1-201ENST00000568729 2216 ntBASIC21.66■■□□□ 1.06
TWNKQ96RR1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TWNKQ96RR1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TWNKQ96RR1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TWNKQ96RR1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TWNKQ96RR1 AC069152.1-201ENST00000438030 544 ntBASIC21.66■■□□□ 1.06
TWNKQ96RR1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.66■■□□□ 1.06
TWNKQ96RR1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.66■■□□□ 1.06
TWNKQ96RR1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TWNKQ96RR1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.66■■□□□ 1.06
TWNKQ96RR1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TWNKQ96RR1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TWNKQ96RR1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms