Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MS4A4EQ96PG1 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.05■□□□□ 0.64
MS4A4EQ96PG1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MS4A4EQ96PG1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
MS4A4EQ96PG1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 AC011767.1-201ENST00000617410 1153 ntBASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MS4A4EQ96PG1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 PGM5P4-201ENST00000421970 445 ntBASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 DUX4L16-201ENST00000555130 1264 ntBASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A4EQ96PG1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 CNN2P6-201ENST00000439038 900 ntBASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A4EQ96PG1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
MS4A4EQ96PG1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.02■□□□□ 0.63
MS4A4EQ96PG1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MS4A4EQ96PG1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 KRT8P36-201ENST00000489121 1440 ntBASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 AC016405.3-201ENST00000607710 860 ntBASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
MS4A4EQ96PG1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19■□□□□ 0.63
MS4A4EQ96PG1 AC087633.2-202ENST00000565166 1439 ntBASIC19■□□□□ 0.63
MS4A4EQ96PG1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A4EQ96PG1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
MS4A4EQ96PG1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
MS4A4EQ96PG1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A4EQ96PG1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms