Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CNTNAP3BQ96NU0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 HCG4P8-203ENST00000443049 980 ntBASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 AC063952.2-201ENST00000498792 1227 ntBASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 AL034346.1-201ENST00000568244 1277 ntBASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CNTNAP3BQ96NU0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CNTNAP3BQ96NU0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 MYC-208ENST00000641036 567 ntBASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CNTNAP3BQ96NU0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 NUDT16P1-203ENST00000513809 620 ntBASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CNTNAP3BQ96NU0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CNTNAP3BQ96NU0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CNTNAP3BQ96NU0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 FITM1-202ENST00000559294 800 ntBASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CNTNAP3BQ96NU0 PKD1P6-201ENST00000343738 4769 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms