Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APH1AQ96BI3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
APH1AQ96BI3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.09■□□□□ 0.49
APH1AQ96BI3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APH1AQ96BI3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APH1AQ96BI3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
APH1AQ96BI3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
APH1AQ96BI3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
APH1AQ96BI3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.09■□□□□ 0.49
APH1AQ96BI3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
APH1AQ96BI3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
APH1AQ96BI3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.09■□□□□ 0.49
APH1AQ96BI3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.09■□□□□ 0.49
APH1AQ96BI3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.09■□□□□ 0.49
APH1AQ96BI3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APH1AQ96BI3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
APH1AQ96BI3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APH1AQ96BI3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APH1AQ96BI3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.09■□□□□ 0.49
APH1AQ96BI3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
APH1AQ96BI3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
APH1AQ96BI3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
APH1AQ96BI3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.08■□□□□ 0.49
APH1AQ96BI3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
APH1AQ96BI3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
APH1AQ96BI3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APH1AQ96BI3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
APH1AQ96BI3 AC069152.1-201ENST00000438030 544 ntBASIC18.08■□□□□ 0.48
APH1AQ96BI3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.08■□□□□ 0.48
APH1AQ96BI3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.08■□□□□ 0.48
APH1AQ96BI3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.08■□□□□ 0.48
APH1AQ96BI3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.08■□□□□ 0.48
APH1AQ96BI3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
APH1AQ96BI3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.08■□□□□ 0.48
APH1AQ96BI3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APH1AQ96BI3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
APH1AQ96BI3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
APH1AQ96BI3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APH1AQ96BI3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
APH1AQ96BI3 KRT17P1-201ENST00000399211 1546 ntBASIC18.08■□□□□ 0.48
APH1AQ96BI3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APH1AQ96BI3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.07■□□□□ 0.48
APH1AQ96BI3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
APH1AQ96BI3 AC006128.1-201ENST00000624704 1661 ntBASIC18.07■□□□□ 0.48
APH1AQ96BI3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
APH1AQ96BI3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.07■□□□□ 0.48
APH1AQ96BI3 AC073210.2-201ENST00000430369 194 ntBASIC18.07■□□□□ 0.48
APH1AQ96BI3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.07■□□□□ 0.48
APH1AQ96BI3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.07■□□□□ 0.48
APH1AQ96BI3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
APH1AQ96BI3 AL356652.1-201ENST00000615962 565 ntBASIC18.07■□□□□ 0.48
APH1AQ96BI3 AC105020.6-201ENST00000621523 1217 ntBASIC18.07■□□□□ 0.48
APH1AQ96BI3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.07■□□□□ 0.48
APH1AQ96BI3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.07■□□□□ 0.48
APH1AQ96BI3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
APH1AQ96BI3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
APH1AQ96BI3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
APH1AQ96BI3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.07■□□□□ 0.48
APH1AQ96BI3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.06■□□□□ 0.48
APH1AQ96BI3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.06■□□□□ 0.48
APH1AQ96BI3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.06■□□□□ 0.48
APH1AQ96BI3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
APH1AQ96BI3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.06■□□□□ 0.48
APH1AQ96BI3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
APH1AQ96BI3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.06■□□□□ 0.48
APH1AQ96BI3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.06■□□□□ 0.48
APH1AQ96BI3 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.06■□□□□ 0.48
APH1AQ96BI3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.06■□□□□ 0.48
APH1AQ96BI3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
APH1AQ96BI3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.06■□□□□ 0.48
APH1AQ96BI3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
APH1AQ96BI3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
APH1AQ96BI3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
APH1AQ96BI3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
APH1AQ96BI3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APH1AQ96BI3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APH1AQ96BI3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APH1AQ96BI3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
APH1AQ96BI3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.05■□□□□ 0.48
APH1AQ96BI3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
APH1AQ96BI3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
APH1AQ96BI3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
APH1AQ96BI3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.05■□□□□ 0.48
APH1AQ96BI3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APH1AQ96BI3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
APH1AQ96BI3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
APH1AQ96BI3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
APH1AQ96BI3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms