Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.31■□□□□ 0.52
PTP4A1Q93096 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.31■□□□□ 0.52
PTP4A1Q93096 YBX1P1-201ENST00000445822 960 ntBASIC18.31■□□□□ 0.52
PTP4A1Q93096 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.31■□□□□ 0.52
PTP4A1Q93096 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.31■□□□□ 0.52
PTP4A1Q93096 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.31■□□□□ 0.52
PTP4A1Q93096 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.31■□□□□ 0.52
PTP4A1Q93096 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.31■□□□□ 0.52
PTP4A1Q93096 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTP4A1Q93096 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.31■□□□□ 0.52
PTP4A1Q93096 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.31■□□□□ 0.52
PTP4A1Q93096 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTP4A1Q93096 TCF3P1-201ENST00000423021 1937 ntBASIC18.31■□□□□ 0.52
PTP4A1Q93096 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTP4A1Q93096 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTP4A1Q93096 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTP4A1Q93096 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PTP4A1Q93096 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PTP4A1Q93096 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTP4A1Q93096 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTP4A1Q93096 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTP4A1Q93096 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTP4A1Q93096 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.3■□□□□ 0.52
PTP4A1Q93096 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTP4A1Q93096 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTP4A1Q93096 MIR2861-201ENST00000636310 90 ntBASIC18.3■□□□□ 0.52
PTP4A1Q93096 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTP4A1Q93096 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTP4A1Q93096 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.3■□□□□ 0.52
PTP4A1Q93096 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTP4A1Q93096 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTP4A1Q93096 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PTP4A1Q93096 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PTP4A1Q93096 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PTP4A1Q93096 AC245052.3-201ENST00000450182 901 ntBASIC18.29■□□□□ 0.52
PTP4A1Q93096 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.29■□□□□ 0.52
PTP4A1Q93096 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.29■□□□□ 0.52
PTP4A1Q93096 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTP4A1Q93096 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PTP4A1Q93096 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PTP4A1Q93096 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.28■□□□□ 0.52
PTP4A1Q93096 AC116050.2-201ENST00000612102 1779 ntBASIC18.28■□□□□ 0.52
PTP4A1Q93096 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PTP4A1Q93096 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.28■□□□□ 0.52
PTP4A1Q93096 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.28■□□□□ 0.52
PTP4A1Q93096 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.28■□□□□ 0.52
PTP4A1Q93096 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.28■□□□□ 0.52
PTP4A1Q93096 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.28■□□□□ 0.52
PTP4A1Q93096 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PTP4A1Q93096 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTP4A1Q93096 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTP4A1Q93096 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
PTP4A1Q93096 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.27■□□□□ 0.52
PTP4A1Q93096 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.27■□□□□ 0.52
PTP4A1Q93096 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.27■□□□□ 0.52
PTP4A1Q93096 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTP4A1Q93096 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PTP4A1Q93096 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.27■□□□□ 0.52
PTP4A1Q93096 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.27■□□□□ 0.52
PTP4A1Q93096 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTP4A1Q93096 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTP4A1Q93096 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PTP4A1Q93096 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
PTP4A1Q93096 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PTP4A1Q93096 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.27■□□□□ 0.52
PTP4A1Q93096 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTP4A1Q93096 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.27■□□□□ 0.51
PTP4A1Q93096 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTP4A1Q93096 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PTP4A1Q93096 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms