Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.68■□□□□ 0.58
CHD6Q8TD26 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHD6Q8TD26 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD6Q8TD26 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD6Q8TD26 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.68■□□□□ 0.58
CHD6Q8TD26 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD6Q8TD26 AC004951.3-201ENST00000418645 1148 ntBASIC18.68■□□□□ 0.58
CHD6Q8TD26 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD6Q8TD26 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD6Q8TD26 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD6Q8TD26 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD6Q8TD26 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD6Q8TD26 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD6Q8TD26 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD6Q8TD26 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD6Q8TD26 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD6Q8TD26 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD6Q8TD26 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD6Q8TD26 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CHD6Q8TD26 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHD6Q8TD26 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CHD6Q8TD26 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD6Q8TD26 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD6Q8TD26 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD6Q8TD26 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD6Q8TD26 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD6Q8TD26 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHD6Q8TD26 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.67■□□□□ 0.58
CHD6Q8TD26 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.67■□□□□ 0.58
CHD6Q8TD26 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.67■□□□□ 0.58
CHD6Q8TD26 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHD6Q8TD26 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.67■□□□□ 0.58
CHD6Q8TD26 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD6Q8TD26 HMGA1P5-201ENST00000412453 271 ntBASIC18.66■□□□□ 0.58
CHD6Q8TD26 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD6Q8TD26 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CHD6Q8TD26 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHD6Q8TD26 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD6Q8TD26 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD6Q8TD26 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD6Q8TD26 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD6Q8TD26 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD6Q8TD26 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.66■□□□□ 0.58
CHD6Q8TD26 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.66■□□□□ 0.58
CHD6Q8TD26 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHD6Q8TD26 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 AC091799.1-201ENST00000422823 811 ntBASIC18.65■□□□□ 0.58
CHD6Q8TD26 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.65■□□□□ 0.58
CHD6Q8TD26 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.65■□□□□ 0.58
CHD6Q8TD26 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.65■□□□□ 0.58
CHD6Q8TD26 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHD6Q8TD26 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.65■□□□□ 0.58
CHD6Q8TD26 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD6Q8TD26 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHD6Q8TD26 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHD6Q8TD26 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.65■□□□□ 0.58
CHD6Q8TD26 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHD6Q8TD26 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.65■□□□□ 0.58
CHD6Q8TD26 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD6Q8TD26 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHD6Q8TD26 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHD6Q8TD26 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD6Q8TD26 KRT16P1-201ENST00000399124 1418 ntBASIC18.64■□□□□ 0.57
CHD6Q8TD26 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD6Q8TD26 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.64■□□□□ 0.57
CHD6Q8TD26 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD6Q8TD26 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD6Q8TD26 COX11P1-201ENST00000489116 835 ntBASIC18.64■□□□□ 0.57
CHD6Q8TD26 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD6Q8TD26 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.64■□□□□ 0.57
CHD6Q8TD26 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHD6Q8TD26 AL139424.1-201ENST00000607572 797 ntBASIC18.64■□□□□ 0.57
CHD6Q8TD26 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.64■□□□□ 0.57
CHD6Q8TD26 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD6Q8TD26 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD6Q8TD26 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CHD6Q8TD26 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD6Q8TD26 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.64■□□□□ 0.57
CHD6Q8TD26 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD6Q8TD26 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD6Q8TD26 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD6Q8TD26 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.64■□□□□ 0.57
CHD6Q8TD26 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.64■□□□□ 0.57
CHD6Q8TD26 AL121829.2-201ENST00000620908 328 ntBASIC18.64■□□□□ 0.57
CHD6Q8TD26 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD6Q8TD26 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.63■□□□□ 0.57
CHD6Q8TD26 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHD6Q8TD26 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms