Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 CYP21A1P-202ENST00000354927 1481 ntBASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 AF106564.1-201ENST00000607058 2553 ntBASIC18.36■□□□□ 0.53
FNDC9Q8TBE3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 AL049796.1-201ENST00000565336 1766 ntBASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 KRT18P6-201ENST00000555540 1265 ntBASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 SLC25A24-204ENST00000569674 2357 ntBASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC9Q8TBE3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 DUSP5P2-201ENST00000426873 1033 ntBASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 CD99P1-205ENST00000527459 561 ntBASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC9Q8TBE3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
FNDC9Q8TBE3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
FNDC9Q8TBE3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
FNDC9Q8TBE3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
FNDC9Q8TBE3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 KRT18P68-201ENST00000392293 1000 ntBASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 AC091874.3-201ENST00000512672 1195 ntBASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 AL589743.5-201ENST00000616611 1050 ntBASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 AC011484.1-201ENST00000377652 1995 ntBASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
FNDC9Q8TBE3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.32■□□□□ 0.52
FNDC9Q8TBE3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.32■□□□□ 0.52
FNDC9Q8TBE3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.32■□□□□ 0.52
FNDC9Q8TBE3 AC026310.3-201ENST00000625186 2373 ntBASIC18.32■□□□□ 0.52
FNDC9Q8TBE3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FNDC9Q8TBE3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FNDC9Q8TBE3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FNDC9Q8TBE3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.32■□□□□ 0.52
FNDC9Q8TBE3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.32■□□□□ 0.52
FNDC9Q8TBE3 AC097658.1-201ENST00000475555 843 ntBASIC18.32■□□□□ 0.52
FNDC9Q8TBE3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.32■□□□□ 0.52
FNDC9Q8TBE3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms