Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 FAM21FP-204ENST00000608637 956 ntBASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 AL512408.1-201ENST00000569378 2000 ntBASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 AL162377.1-201ENST00000618844 1793 ntBASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 CDCA4P2-201ENST00000441182 718 ntBASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 AC092720.2-201ENST00000602388 1665 ntBASIC21.09■□□□□ 0.97
PCDH19Q8TAB3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 KRT8P36-201ENST00000489121 1440 ntBASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 AL162412.1-201ENST00000567129 965 ntBASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 RAP2CP1-201ENST00000605103 478 ntBASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH19Q8TAB3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH19Q8TAB3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.08■□□□□ 0.96
PCDH19Q8TAB3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH19Q8TAB3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH19Q8TAB3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDH19Q8TAB3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH19Q8TAB3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH19Q8TAB3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH19Q8TAB3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 AC068338.2-201ENST00000563278 1430 ntBASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH19Q8TAB3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH19Q8TAB3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms