Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.1■■□□□ 1.29
RETREG2Q8NC44 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RETREG2Q8NC44 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RETREG2Q8NC44 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RETREG2Q8NC44 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.1■■□□□ 1.29
RETREG2Q8NC44 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.1■■□□□ 1.29
RETREG2Q8NC44 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RETREG2Q8NC44 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.1■■□□□ 1.29
RETREG2Q8NC44 UNC93B4-201ENST00000505679 747 ntBASIC23.1■■□□□ 1.29
RETREG2Q8NC44 AC073648.6-201ENST00000641589 218 ntBASIC23.1■■□□□ 1.29
RETREG2Q8NC44 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.1■■□□□ 1.29
RETREG2Q8NC44 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RETREG2Q8NC44 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.1■■□□□ 1.29
RETREG2Q8NC44 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 AL596275.1-201ENST00000423464 877 ntBASIC23.09■■□□□ 1.29
RETREG2Q8NC44 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 CDV3P1-201ENST00000471403 739 ntBASIC23.09■■□□□ 1.29
RETREG2Q8NC44 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
RETREG2Q8NC44 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 AC091799.1-201ENST00000422823 811 ntBASIC23.08■■□□□ 1.29
RETREG2Q8NC44 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
RETREG2Q8NC44 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
RETREG2Q8NC44 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
RETREG2Q8NC44 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.28
RETREG2Q8NC44 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
RETREG2Q8NC44 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RETREG2Q8NC44 AL049796.1-201ENST00000565336 1766 ntBASIC23.06■■□□□ 1.28
RETREG2Q8NC44 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 AL355472.2-201ENST00000422958 438 ntBASIC23.06■■□□□ 1.28
RETREG2Q8NC44 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
RETREG2Q8NC44 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RETREG2Q8NC44 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms