Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 AL589743.5-201ENST00000616611 1050 ntBASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH20Q8N6Y1 KRT17P1-201ENST00000399211 1546 ntBASIC20.83■□□□□ 0.92
PCDH20Q8N6Y1 FEM1AP4-201ENST00000443167 1987 ntBASIC20.83■□□□□ 0.92
PCDH20Q8N6Y1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH20Q8N6Y1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 KRT18P68-201ENST00000392293 1000 ntBASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCDH20Q8N6Y1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 AC091874.3-201ENST00000512672 1195 ntBASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH20Q8N6Y1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 DUSP5P2-201ENST00000426873 1033 ntBASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 AC097658.1-201ENST00000475555 843 ntBASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH20Q8N6Y1 AC087633.2-202ENST00000565166 1439 ntBASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 AF106564.1-201ENST00000607058 2553 ntBASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH20Q8N6Y1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms