Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 AL512625.2-201ENST00000417533 625 ntBASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCDC146Q8IYE0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 AC092667.1-201ENST00000434301 2586 ntBASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 MCRIP2P1-201ENST00000394346 511 ntBASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 AC073314.1-201ENST00000568729 2216 ntBASIC27.09■■□□□ 1.93
CCDC146Q8IYE0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 ID1-201ENST00000376105 1233 ntBASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 BX276092.2-201ENST00000417668 665 ntBASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCDC146Q8IYE0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.92
CCDC146Q8IYE0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CCDC146Q8IYE0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
CCDC146Q8IYE0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 AC087633.2-202ENST00000565166 1439 ntBASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 MIPEPP3-201ENST00000412105 444 ntBASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CCDC146Q8IYE0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CCDC146Q8IYE0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC27.05■■□□□ 1.92
CCDC146Q8IYE0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC27.05■■□□□ 1.92
CCDC146Q8IYE0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.05■■□□□ 1.92
CCDC146Q8IYE0 AC100791.3-201ENST00000617619 330 ntBASIC27.05■■□□□ 1.92
CCDC146Q8IYE0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
CCDC146Q8IYE0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
CCDC146Q8IYE0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 KRT18P68-201ENST00000392293 1000 ntBASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 AL356652.1-201ENST00000615962 565 ntBASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms