Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRTM4Q86VH4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 AC083880.1-201ENST00000608266 535 ntBASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 AC006128.1-201ENST00000624704 1661 ntBASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRTM4Q86VH4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRTM4Q86VH4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM4Q86VH4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 CD99P1-205ENST00000527459 561 ntBASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM4Q86VH4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 KRT8P36-201ENST00000489121 1440 ntBASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM4Q86VH4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRTM4Q86VH4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRTM4Q86VH4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.02■□□□□ 0.79
LRRTM4Q86VH4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LRRTM4Q86VH4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms