Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 AC139530.1-201ENST00000575312 1977 ntBASIC17.38■□□□□ 0.37
CSMD2Q7Z408 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CSMD2Q7Z408 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 AL353807.1-201ENST00000427475 662 ntBASIC17.37■□□□□ 0.37
CSMD2Q7Z408 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 AC116050.2-201ENST00000612102 1779 ntBASIC17.37■□□□□ 0.37
CSMD2Q7Z408 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.37■□□□□ 0.37
CSMD2Q7Z408 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.36■□□□□ 0.37
CSMD2Q7Z408 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 KRT18P48-201ENST00000434763 852 ntBASIC17.35■□□□□ 0.37
CSMD2Q7Z408 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CSMD2Q7Z408 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.34■□□□□ 0.37
CSMD2Q7Z408 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.34■□□□□ 0.37
CSMD2Q7Z408 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms