Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTL4Q6ZR62 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTL4Q6ZR62 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RTL4Q6ZR62 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTL4Q6ZR62 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
RTL4Q6ZR62 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTL4Q6ZR62 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 AC091799.1-201ENST00000422823 811 ntBASIC19.08■□□□□ 0.64
RTL4Q6ZR62 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 GUSBP6-202ENST00000438529 1198 ntBASIC19.08■□□□□ 0.64
RTL4Q6ZR62 CDV3P1-201ENST00000471403 739 ntBASIC19.08■□□□□ 0.64
RTL4Q6ZR62 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.08■□□□□ 0.64
RTL4Q6ZR62 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 AL512625.2-201ENST00000417533 625 ntBASIC19.07■□□□□ 0.64
RTL4Q6ZR62 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 AC016405.3-201ENST00000607710 860 ntBASIC19.07■□□□□ 0.64
RTL4Q6ZR62 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTL4Q6ZR62 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 RARRES2P4-201ENST00000514074 484 ntBASIC19.06■□□□□ 0.64
RTL4Q6ZR62 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RTL4Q6ZR62 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 MKRN4P-201ENST00000444706 1521 ntBASIC19.05■□□□□ 0.64
RTL4Q6ZR62 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 AC142086.2-201ENST00000569753 217 ntBASIC19.05■□□□□ 0.64
RTL4Q6ZR62 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RTL4Q6ZR62 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 FAM21FP-204ENST00000608637 956 ntBASIC19.04■□□□□ 0.64
RTL4Q6ZR62 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.04■□□□□ 0.64
RTL4Q6ZR62 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms