Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 AC006015.1-201ENST00000429970 570 ntBASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 AL356652.1-201ENST00000615962 565 ntBASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
FOXR2Q6PJQ5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 MFSD11-216ENST00000590393 1141 ntBASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
FOXR2Q6PJQ5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 MIR935-201ENST00000401179 91 ntBASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FOXR2Q6PJQ5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FOXR2Q6PJQ5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 CNN2P6-201ENST00000439038 900 ntBASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 AC137761.2-201ENST00000561729 223 ntBASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 AC145350.3-201ENST00000569033 163 ntBASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 AC016405.3-201ENST00000607710 860 ntBASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.24■■□□□ 1.15
FOXR2Q6PJQ5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms