Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFWD3Q6PCD5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 AL049796.1-201ENST00000565336 1766 ntBASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.25■□□□□ 0.99
RFWD3Q6PCD5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 AC073210.2-201ENST00000430369 194 ntBASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 CYP2T3P-201ENST00000601990 817 ntBASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 AC092118.2-201ENST00000613495 667 ntBASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RFWD3Q6PCD5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 MCRIP2P1-201ENST00000394346 511 ntBASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 AC100791.3-201ENST00000617619 330 ntBASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RFWD3Q6PCD5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 CYP21A1P-202ENST00000354927 1481 ntBASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.22■□□□□ 0.99
RFWD3Q6PCD5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms