Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 PNMA6B-201ENST00000538162 1200 ntBASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 C2orf69P4-201ENST00000565394 541 ntBASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 AC008687.6-201ENST00000596318 630 ntBASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 AC008403.3-201ENST00000598924 454 ntBASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H3F3CQ6NXT2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 AL356652.1-201ENST00000615962 565 ntBASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
H3F3CQ6NXT2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 AC006058.3-201ENST00000606217 1069 ntBASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 AC066615.1-201ENST00000640911 628 ntBASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 AL121603.2-201ENST00000557373 2117 ntBASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.86■□□□□ 0.61
H3F3CQ6NXT2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 AC092368.3-202ENST00000574180 1591 ntBASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 UNC93B4-201ENST00000505679 747 ntBASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H3F3CQ6NXT2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 AC128676.1-201ENST00000454392 318 ntBASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 AC007375.3-201ENST00000600936 2314 ntBASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H3F3CQ6NXT2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms