Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPAQ5VT25 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC31.24■■■□□ 2.59
CDC42BPAQ5VT25 RCN1P1-201ENST00000400413 996 ntBASIC31.24■■■□□ 2.59
CDC42BPAQ5VT25 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC31.24■■■□□ 2.59
CDC42BPAQ5VT25 GUSBP5-202ENST00000510805 1989 ntBASIC31.23■■■□□ 2.59
CDC42BPAQ5VT25 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPAQ5VT25 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPAQ5VT25 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC31.23■■■□□ 2.59
CDC42BPAQ5VT25 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPAQ5VT25 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPAQ5VT25 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
CDC42BPAQ5VT25 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.23■■■□□ 2.59
CDC42BPAQ5VT25 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
CDC42BPAQ5VT25 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
CDC42BPAQ5VT25 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 MIR1224-201ENST00000408193 85 ntBASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC31.22■■■□□ 2.59
CDC42BPAQ5VT25 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 CABP2-204ENST00000636477 941 ntTSL 5 BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPAQ5VT25 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.59
CDC42BPAQ5VT25 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CDC42BPAQ5VT25 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
CDC42BPAQ5VT25 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CDC42BPAQ5VT25 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
CDC42BPAQ5VT25 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC31.2■■■□□ 2.58
CDC42BPAQ5VT25 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CDC42BPAQ5VT25 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CDC42BPAQ5VT25 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CDC42BPAQ5VT25 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC31.19■■■□□ 2.58
CDC42BPAQ5VT25 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
CDC42BPAQ5VT25 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
CDC42BPAQ5VT25 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDC42BPAQ5VT25 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDC42BPAQ5VT25 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC31.19■■■□□ 2.58
CDC42BPAQ5VT25 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
CDC42BPAQ5VT25 REXO1L12P-201ENST00000622156 912 ntBASIC31.19■■■□□ 2.58
CDC42BPAQ5VT25 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
CDC42BPAQ5VT25 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 PRKY-204ENST00000533551 1019 ntBASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDC42BPAQ5VT25 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 GALC-202ENST00000393568 2054 ntTSL 2 BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 KRT18P21-201ENST00000515767 1272 ntBASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 MIR2861-201ENST00000636310 90 ntBASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 AC097493.4-201ENST00000641197 219 ntBASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 AC124283.5-201ENST00000624661 1809 ntBASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 KRT17P2-201ENST00000300992 1314 ntBASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
CDC42BPAQ5VT25 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 TREX2-204ENST00000370212 861 ntTSL 5 BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
CDC42BPAQ5VT25 AL390719.1-204ENST00000412397 1219 ntBASIC31.16■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms