Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 AC138907.5-202ENST00000569484 235 ntBASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 NTF6G-201ENST00000591094 616 ntBASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.65■□□□□ 0.42
ATPAF1Q5TC12 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ATPAF1Q5TC12 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ATPAF1Q5TC12 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 AC138932.1-201ENST00000534164 6830 ntBASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 AC004854.2-201ENST00000608450 1441 ntBASIC17.64■□□□□ 0.41
ATPAF1Q5TC12 AC027702.1-201ENST00000563810 1770 ntBASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 KRT19P1-201ENST00000405746 1186 ntBASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATPAF1Q5TC12 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATPAF1Q5TC12 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms