Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNFT1Q5M7Z0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 UBE2SP1-201ENST00000450587 669 ntBASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 AC008550.1-201ENST00000511500 884 ntBASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNFT1Q5M7Z0 AL024507.2-201ENST00000606070 2574 ntBASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 AC006557.6-201ENST00000623071 864 ntBASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNFT1Q5M7Z0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 FAM197Y4-202ENST00000622692 608 ntBASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNFT1Q5M7Z0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 AC005829.2-201ENST00000571422 1056 ntBASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNFT1Q5M7Z0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms