Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRTCAP3Q53RY4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 AC012618.2-201ENST00000428058 849 ntBASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.33■□□□□ 0.52
KRTCAP3Q53RY4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
KRTCAP3Q53RY4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 AC239809.2-201ENST00000415381 517 ntBASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 AC124016.1-201ENST00000609552 612 ntBASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 AC110285.5-201ENST00000611501 352 ntBASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 AC006557.6-201ENST00000623071 864 ntBASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 AC073912.3-201ENST00000624414 853 ntBASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRTCAP3Q53RY4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 KRT17P2-201ENST00000300992 1314 ntBASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 RPS2P55-201ENST00000397318 883 ntBASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 SNORA78-201ENST00000459373 127 ntBASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 AC107956.1-201ENST00000494359 873 ntBASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 AC233702.5-201ENST00000584107 538 ntBASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 AC233723.2-201ENST00000623798 2106 ntBASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 AL023875.1-201ENST00000640777 796 ntBASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
KRTCAP3Q53RY4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms